EnhancerDB
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  3. rs145698696[chr12:52551728]
Enhancers that have rs145698696[chr12:52551728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs145698696[chr12:52551728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52551132 52552068 ZNF143 GTRD no Epithelial (MCF-7) 21546529
chr12 52551133 52551759 ZNF143 GTRD no Epithelial (MCF-7) 21546530
chr12 52551241 52551991 ZNF143 GTRD no Epithelial (MCF-7) 21546531
chr12 52551267 52551985 ZNF143 GTRD no Epithelial (MCF-7) 21546532
chr12 52551469 52551770 ZNF274 GTRD no Liver (HepG2) 21546533
chr12 52551624 52551925 TCF7L2 GTRD no Colon (HCT116) 21546534
chr12 52551718 52551733 TFAP2A JASPAR yes 120923432
chr12 52551721 52551733 TFAP2A JASPAR yes 120923433
chr12 52551721 52551733 TFAP2B JASPAR yes 120923434
chr12 52551721 52551733 TFAP2C JASPAR yes 120923435
chr12 52551723 52551732 TFAP2A JASPAR yes 120923436
chr12 52551727 52551742 HNF4A JASPAR yes 120923437
chr12 52551728 52551742 NR2F1 JASPAR yes 120923438
chr12 52551728 52551743 HNF4G JASPAR yes 120923439
Genes associated with rs145698696[chr12:52551728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More