EnhancerDB
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  3. rs145983223[chr1:1616011]
Enhancers that have rs145983223[chr1:1616011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs145983223[chr1:1616011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1616002 1616019 RARA JASPAR yes 26198801
chr1 1616002 1616019 RXRA JASPAR yes 26198802
chr1 1616009 1616019 RORA JASPAR yes 26198804
chr1 1616010 1616021 ESRRA JASPAR yes 26198805
chr1 1616010 1616021 ESRRB JASPAR yes 26198806
chr1 1616010 1616023 NR2F1 JASPAR yes 26198807
Genes associated with rs145983223[chr1:1616011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More