EnhancerDB
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  3. rs146002542[chr17:55629797]
Enhancers that have rs146002542[chr17:55629797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146002542[chr17:55629797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55629780 55629801 ZNF263 JASPAR yes 54968529
chr17 55629788 55629807 CTCF JASPAR yes 54968531
chr17 55629793 55629797 LFA1 TRANSFAC yes 54968532
chr17 55629797 55629812 HSF1 JASPAR yes 54968533
Genes associated with rs146002542[chr17:55629797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More