EnhancerDB
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  3. rs146182408[chr1:232067562]
Enhancers that have rs146182408[chr1:232067562]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232052045 232079775 enh12783
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs146182408[chr1:232067562]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232067554 232067564 POU6F2 JASPAR yes 36124632
chr1 232067555 232067565 ALX3 JASPAR yes 36124633
chr1 232067555 232067565 GSX2 JASPAR yes 36124634
chr1 232067555 232067565 HOXB2 JASPAR yes 36124635
chr1 232067555 232067565 MNX1 JASPAR yes 36124636
chr1 232067555 232067566 HOXA10 JASPAR yes 36124637
chr1 232067556 232067564 LMX1A JASPAR yes 36124638
chr1 232067556 232067564 LMX1B JASPAR yes 36124639
chr1 232067556 232067564 NKX6-1 JASPAR yes 36124640
chr1 232067556 232067564 NKX6-2 JASPAR yes 36124641
chr1 232067556 232067564 VAX1 JASPAR yes 36124642
chr1 232067556 232067564 VAX2 JASPAR yes 36124643
chr1 232067556 232067564 VSX1 JASPAR yes 36124644
chr1 232067556 232067564 VSX2 JASPAR yes 36124645
chr1 232067561 232067567 TBP TRANSFAC yes 36124646
Genes associated with rs146182408[chr1:232067562], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More