EnhancerDB
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  3. rs146190729[chr3:57956531]
Enhancers that have rs146190729[chr3:57956531]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146190729[chr3:57956531]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57956511 57956532 REST JASPAR yes 2658900
chr3 57956529 57956541 PKNOX1 JASPAR yes 2658904
chr3 57956529 57956541 TGIF1 JASPAR yes 2658905
chr3 57956529 57956541 TGIF2 JASPAR yes 2658906
chr3 57956530 57956540 FIGLA JASPAR yes 2658907
chr3 57956530 57956540 ID4 JASPAR yes 2658908
chr3 57956530 57956540 TCF3 JASPAR yes 2658909
chr3 57956530 57956540 TCF4 JASPAR yes 2658910
chr3 57956531 57956540 SNAI2 JASPAR yes 2658911
Genes associated with rs146190729[chr3:57956531], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More