EnhancerDB
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  3. rs146207427[chr17:2856103]
Enhancers that have rs146207427[chr17:2856103]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs146207427[chr17:2856103]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2856091 2856112 IRF1 JASPAR yes 52789022
chr17 2856097 2856118 IRF1 JASPAR yes 52789024
chr17 2856098 2856113 FOXP1 JASPAR yes 52789025
chr17 2856098 2856119 IRF1 JASPAR yes 52789026
chr17 2856099 2856110 FOXP2 JASPAR yes 52789027
chr17 2856099 2856114 STAT2 JASPAR yes 52789028
chr17 2856100 2856115 FOXP1 JASPAR yes 52789029
chr17 2856102 2856117 FOXP1 JASPAR yes 52789030
chr17 2856103 2856118 FOXP1 JASPAR yes 52789031
Genes associated with rs146207427[chr17:2856103], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More