EnhancerDB
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  3. rs146212556[chr1:95265073]
Enhancers that have rs146212556[chr1:95265073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95264854 95265185 vista2576
VISTA
Transcript factors that have rs146212556[chr1:95265073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95264812 95265088 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107816022
chr1 95264827 95265117 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107816023
chr1 95264968 95265182 TCF7L2 GTRD no Colon (HCT116) 107816024
chr1 95265035 95265526 SOX2 GTRD no Neural Stem Cells (H9) 107816025
chr1 95265066 95265080 SPI1 JASPAR yes 30917715
chr1 95265066 95265080 SPI1 JASPAR yes 118334216
chr1 95265070 95265075 TFAP2A TRANSFAC yes 30917716
chr1 95265070 95265075 TFAP2A TRANSFAC yes 118334217
chr1 95265070 95265076 MZF1 JASPAR yes 30917717
chr1 95265070 95265076 MZF1 JASPAR yes 118334218
Genes associated with rs146212556[chr1:95265073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More