EnhancerDB
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  3. rs146238125[chr1:54828821]
Enhancers that have rs146238125[chr1:54828821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs146238125[chr1:54828821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54828812 54828824 TAL1 JASPAR yes 28977885
chr1 54828813 54828826 ZBTB18 JASPAR yes 28977886
chr1 54828814 54828824 FIGLA JASPAR yes 28977887
chr1 54828814 54828824 MSC JASPAR yes 28977888
chr1 54828814 54828824 TFAP4 JASPAR yes 28977889
chr1 54828814 54828826 TAL1 JASPAR yes 28977890
chr1 54828821 54828826 GATA2 JASPAR yes 28977891
Genes associated with rs146238125[chr1:54828821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More