EnhancerDB
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  3. rs146268642[chr1:110330612]
Enhancers that have rs146268642[chr1:110330612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110323180 110341767 enh12126
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146268642[chr1:110330612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110329902 110330621 ZNF274 GTRD no Bone Marrow (K562) 21327147
chr1 110330138 110330651 ZNF274 GTRD no Liver (HepG2) 21327153
chr1 110330205 110330645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21327156
chr1 110330267 110331177 ZNF274 GTRD no Liver (HepG2) 21327159
chr1 110330306 110330624 ZNF274 GTRD no Liver (HepG2) 21327160
chr1 110330334 110330641 ZNF274 GTRD no Bone Marrow (K562) 21327161
chr1 110330364 110330619 ZNF274 GTRD no Liver (HepG2) 21327162
chr1 110330595 110330615 ESR1 JASPAR yes 31438393
chr1 110330601 110330616 TFAP2C JASPAR yes 31438396
chr1 110330603 110330616 TFAP2A JASPAR yes 31438397
chr1 110330603 110330616 TFAP2B JASPAR yes 31438398
chr1 110330603 110330616 TFAP2C JASPAR yes 31438399
chr1 110330603 110330618 TFAP2A JASPAR yes 31438400
chr1 110330604 110330615 EBF1 JASPAR yes 31438401
chr1 110330606 110330615 TFAP2A JASPAR yes 31438402
Genes associated with rs146268642[chr1:110330612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More