EnhancerDB
  1. Home
  2. SNP
  3. rs146304560[chr12:52534794]
Enhancers that have rs146304560[chr12:52534794]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs146304560[chr12:52534794]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52534104 52534977 ZNF143 GTRD no Epithelial (MCF-7) 21546293
chr12 52534184 52535257 ZNF274 GTRD no Cervix (HeLa-S3) 21546294
chr12 52534313 52535240 ZNF143 GTRD no Epithelial (MCF-7) 21546295
chr12 52534362 52535003 ZNF143 GTRD no Epithelial (MCF-7) 21546296
chr12 52534364 52534935 ZNF143 GTRD no Epithelial (MCF-7) 21546297
chr12 52534372 52535248 ZNF143 GTRD no Epithelial (MCF-7) 21546298
chr12 52534431 52534877 ZNF274 GTRD no Liver (HepG2) 21546299
chr12 52534452 52534879 ZNF143 GTRD no Epithelial (MCF-7) 21546301
chr12 52534462 52534895 ZNF274 GTRD no Liver (HepG2) 21546302
chr12 52534466 52535048 ZNF143 GTRD no Epithelial (MCF-7) 21546304
chr12 52534467 52534885 ZNF274 GTRD no Liver (HepG2) 21546305
chr12 52534468 52534914 ZNF274 GTRD no Liver (HepG2) 21546306
chr12 52534518 52535010 ZNF143 GTRD no Epithelial (MCF-7) 21546307
chr12 52534525 52535133 ZNF274 GTRD no Liver (HepG2) 21546308
chr12 52534533 52534925 ZNF274 GTRD no Cervix (HeLa-S3) 21546310
chr12 52534546 52534939 ZNF143 GTRD no Epithelial (MCF-7) 21546311
chr12 52534553 52534811 ZNF143 GTRD no Epithelial (MCF-7) 21546312
chr12 52534554 52534955 ZNF143 GTRD no Epithelial (MCF-7) 21546313
chr12 52534572 52534871 ZNF274 GTRD no Liver (HepG2) 21546315
chr12 52534577 52534861 ZNF274 GTRD no Cervix (HeLa-S3) 21546316
chr12 52534784 52534796 INSM1 JASPAR yes 120920987
chr12 52534784 52534799 ZIC4 JASPAR yes 120920988
chr12 52534786 52534797 GCM1 JASPAR yes 120920989
chr12 52534792 52534797 SP1 TRANSFAC yes 120920990
Genes associated with rs146304560[chr12:52534794], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 52463030 52471278 + C12orf44 ENSG00000123395.10 52463030 63516 Breast 0.802806 12077
chr12 52463030 52471278 + C12orf44 ENSG00000123395.10 52463030 63516 Liver 0.439373 12077