EnhancerDB
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  3. rs146394042[chr6:25362227]
Enhancers that have rs146394042[chr6:25362227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25357285 25373535 enh38931
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs146394042[chr6:25362227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25362211 25362232 IRF1 JASPAR yes 100851355
chr6 25362212 25362227 FOXP1 JASPAR yes 100851356
chr6 25362215 25362229 SPIC JASPAR yes 100851358
chr6 25362215 25362229 STAT1 JASPAR yes 100851359
chr6 25362215 25362230 PRDM1 JASPAR yes 100851360
chr6 25362215 25362230 STAT2 JASPAR yes 100851361
chr6 25362217 25362238 IRF1 JASPAR yes 100851362
chr6 25362220 25362234 IRF7 JASPAR yes 100851363
Genes associated with rs146394042[chr6:25362227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More