EnhancerDB
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  3. rs146397600[chr1:113542106]
Enhancers that have rs146397600[chr1:113542106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113523667 113552555 enh569
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs146397600[chr1:113542106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113541872 113542851 AR GTRD no Prostate (PC-3) 21329795
chr1 113541882 113542808 P63 GTRD no Skin (Keratinocyte) 21329796
chr1 113541954 113542902 P63 GTRD no Skin (Keratinocyte) 21329797
chr1 113541992 113542895 P63 GTRD no Skin (Keratinocyte) 21329798
chr1 113542076 113542537 ZNF274 GTRD no Liver (HepG2) 21329799
chr1 113542084 113542854 P63 GTRD no Skin (Keratinocyte) 21329800
chr1 113542095 113542108 SMAD2 JASPAR yes 31605795
chr1 113542098 113542108 TBR1 JASPAR yes 31605796
chr1 113542099 113542109 TBX21 JASPAR yes 31605797
chr1 113542100 113542108 MGA JASPAR yes 31605798
chr1 113542100 113542108 TBX15 JASPAR yes 31605799
chr1 113542100 113542108 TBX1 JASPAR yes 31605800
chr1 113542100 113542108 TBX4 JASPAR yes 31605801
chr1 113542100 113542108 TBX5 JASPAR yes 31605802
chr1 113542100 113542109 ZEB1 JASPAR yes 31605803
chr1 113542100 113542112 PKNOX1 JASPAR yes 31605804
chr1 113542100 113542112 TGIF1 JASPAR yes 31605805
chr1 113542100 113542113 ZBTB18 JASPAR yes 31605806
chr1 113542101 113542111 FIGLA JASPAR yes 31605807
chr1 113542101 113542111 ID4 JASPAR yes 31605808
chr1 113542101 113542111 TCF3 JASPAR yes 31605809
chr1 113542101 113542111 TCF4 JASPAR yes 31605810
chr1 113542102 113542111 SNAI2 JASPAR yes 31605811
chr1 113542103 113542108 USF2 TRANSFAC yes 31605812
Genes associated with rs146397600[chr1:113542106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More