EnhancerDB
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  3. rs146397944[chr17:25878610]
Enhancers that have rs146397944[chr17:25878610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs146397944[chr17:25878610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25878600 25878618 SRF JASPAR yes 53644514
chr17 25878602 25878618 SRF JASPAR yes 53644515
chr17 25878602 25878620 SRF JASPAR yes 53644516
chr17 25878603 25878615 SRF JASPAR yes 53644518
chr17 25878606 25878610 H1TF2 TRANSFAC yes 53644519
chr17 25878606 25878610 NFE TRANSFAC yes 53644520
chr17 25878606 25878610 SRF TRANSFAC yes 53644521
chr17 25878608 25878620 POU2F1 JASPAR yes 53644522
chr17 25878608 25878621 POU3F3 JASPAR yes 53644523
chr17 25878608 25878622 POU1F1 JASPAR yes 53644524
chr17 25878609 25878621 POU3F1 JASPAR yes 53644525
chr17 25878609 25878621 POU3F2 JASPAR yes 53644526
chr17 25878610 25878619 POU3F4 JASPAR yes 53644527
chr17 25878610 25878619 POU5F1B JASPAR yes 53644528
Genes associated with rs146397944[chr17:25878610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More