EnhancerDB
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  3. rs146399080[chr17:62979424]
Enhancers that have rs146399080[chr17:62979424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146399080[chr17:62979424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62979403 62979424 IRF1 JASPAR yes 55335106
chr17 62979404 62979425 IRF1 JASPAR yes 55335108
chr17 62979405 62979426 IRF1 JASPAR yes 55335109
chr17 62979409 62979430 IRF1 JASPAR yes 55335110
chr17 62979410 62979425 FOXP1 JASPAR yes 55335111
chr17 62979410 62979431 IRF1 JASPAR yes 55335112
chr17 62979411 62979426 STAT2 JASPAR yes 55335113
chr17 62979414 62979435 IRF1 JASPAR yes 55335114
chr17 62979415 62979430 FOXP1 JASPAR yes 55335115
chr17 62979415 62979436 IRF1 JASPAR yes 55335116
chr17 62979419 62979440 IRF1 JASPAR yes 55335117
chr17 62979420 62979435 FOXP1 JASPAR yes 55335118
Genes associated with rs146399080[chr17:62979424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More