EnhancerDB
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  3. rs146407413[chr17:55491443]
Enhancers that have rs146407413[chr17:55491443]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146407413[chr17:55491443]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55491437 55491448 CDX2 JASPAR yes 54952697
chr17 55491438 55491449 HOXA10 JASPAR yes 54952698
chr17 55491439 55491448 CDX1 JASPAR yes 54952699
chr17 55491439 55491449 HOXA13 JASPAR yes 54952700
chr17 55491439 55491449 HOXB13 JASPAR yes 54952701
chr17 55491439 55491449 HOXD13 JASPAR yes 54952702
chr17 55491439 55491454 MEF2C JASPAR yes 54952703
chr17 55491440 55491453 POU3F3 JASPAR yes 54952704
chr17 55491440 55491455 MEF2A JASPAR yes 54952705
chr17 55491441 55491453 MEF2A JASPAR yes 54952706
chr17 55491441 55491453 MEF2B JASPAR yes 54952707
chr17 55491441 55491453 MEF2D JASPAR yes 54952708
chr17 55491442 55491452 MEF2A JASPAR yes 54952709
Genes associated with rs146407413[chr17:55491443], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More