EnhancerDB
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  3. rs146432040[chr6:11261267]
Enhancers that have rs146432040[chr6:11261267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
chr6 11260945 11261346 vista50796
VISTA
Transcript factors that have rs146432040[chr6:11261267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11261256 11261267 HOXA10 JASPAR yes 70307600
chr6 11261256 11261267 HOXC11 JASPAR yes 70307601
chr6 11261256 11261267 HOXC12 JASPAR yes 70307602
chr6 11261256 11261267 HOXD12 JASPAR yes 70307603
chr6 11261256 11261267 HOXA10 JASPAR yes 99869985
chr6 11261256 11261267 HOXC11 JASPAR yes 99869986
chr6 11261256 11261267 HOXC12 JASPAR yes 99869987
chr6 11261256 11261267 HOXD12 JASPAR yes 99869988
chr6 11261257 11261267 GSX2 JASPAR yes 70307604
chr6 11261257 11261267 HOXB3 JASPAR yes 70307605
chr6 11261257 11261267 MEOX2 JASPAR yes 70307606
chr6 11261257 11261267 MNX1 JASPAR yes 70307607
chr6 11261257 11261267 GSX2 JASPAR yes 99869989
chr6 11261257 11261267 HOXB3 JASPAR yes 99869990
chr6 11261257 11261267 MEOX2 JASPAR yes 99869991
chr6 11261257 11261267 MNX1 JASPAR yes 99869992
chr6 11261264 11261274 HOXA13 JASPAR yes 70307609
chr6 11261264 11261274 HOXA13 JASPAR yes 99869994
chr6 11261266 11261270 TEAD2 TRANSFAC yes 70307610
chr6 11261266 11261270 TEAD2 TRANSFAC yes 99869995
chr6 11261266 11261271 TBP TRANSFAC yes 70307611
chr6 11261266 11261271 TBP TRANSFAC yes 99869996
chr6 11261266 11261272 TFIID TRANSFAC yes 70307612
chr6 11261266 11261272 TFIID TRANSFAC yes 99869997
Genes associated with rs146432040[chr6:11261267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More