EnhancerDB
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  3. rs146462643[chr16:25060481]
Enhancers that have rs146462643[chr16:25060481]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 25036065 25069195 enh3955
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs146462643[chr16:25060481]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25059982 25060578 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700019
chr16 25059989 25060613 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700022
chr16 25060044 25060548 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700024
chr16 25060082 25060538 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700026
chr16 25060173 25060833 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700028
chr16 25060218 25060814 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700030
chr16 25060264 25060924 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700031
chr16 25060264 25060924 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108189655
chr16 25060300 25060984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21700032
chr16 25060300 25060984 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108189656
chr16 25060350 25060580 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21700033
chr16 25060384 25061497 ZNF274 GTRD no Bone Marrow (K562) 21700034
chr16 25060384 25061497 ZNF274 GTRD no Bone Marrow (K562) 108189657
chr16 25060476 25060481 SP1 TRANSFAC yes 10099772
Genes associated with rs146462643[chr16:25060481], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More