EnhancerDB
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  3. rs146512462[chr17:2048095]
Enhancers that have rs146512462[chr17:2048095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2037625 2052035 enh4206
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs146512462[chr17:2048095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2048090 2048101 HOXC11 JASPAR yes 52729449
chr17 2048090 2048101 HOXC12 JASPAR yes 52729450
chr17 2048090 2048101 HOXC13 JASPAR yes 52729451
chr17 2048090 2048101 HOXD12 JASPAR yes 52729452
chr17 2048091 2048101 HOXC10 JASPAR yes 52729453
chr17 2048091 2048101 HOXD11 JASPAR yes 52729454
Genes associated with rs146512462[chr17:2048095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More