EnhancerDB
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  3. rs146525905[chr2:232475494]
Enhancers that have rs146525905[chr2:232475494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs146525905[chr2:232475494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232475484 232475499 TFAP2A JASPAR yes 81725553
chr2 232475484 232475499 TFAP2C JASPAR yes 81725554
chr2 232475487 232475498 EBF1 JASPAR yes 81725555
chr2 232475487 232475498 TFAP2A JASPAR yes 81725556
chr2 232475487 232475498 TFAP2B JASPAR yes 81725557
chr2 232475487 232475500 TFAP2A JASPAR yes 81725558
chr2 232475487 232475500 TFAP2B JASPAR yes 81725559
chr2 232475487 232475500 TFAP2C JASPAR yes 81725560
chr2 232475488 232475497 TFAP2A JASPAR yes 81725561
chr2 232475489 232475500 EBF1 JASPAR yes 81725562
chr2 232475494 232475499 SP1 TRANSFAC yes 81725563
Genes associated with rs146525905[chr2:232475494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More