EnhancerDB
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  3. rs146529967[chr1:95258397]
Enhancers that have rs146529967[chr1:95258397]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95258204 95258621 vista2573
VISTA
Transcript factors that have rs146529967[chr1:95258397]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95257529 95258417 ZNF274 GTRD no Bone Marrow (K562) 107815981
chr1 95257589 95258509 ZNF274 GTRD no Liver (HepG2) 107815983
chr1 95257664 95258424 ZNF274 GTRD no Bone Marrow (K562) 107815988
chr1 95257685 95258469 ZNF274 GTRD no Bone Marrow (K562) 107815990
chr1 95257685 95258493 ZNF274 GTRD no Bone Marrow (K562) 107815991
chr1 95257911 95258461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815998
chr1 95257936 95258532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107815999
chr1 95257960 95258415 CTCF UCSC Txn Factor no Conserved 107816000
chr1 95258034 95258430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816003
chr1 95258058 95258428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816007
chr1 95258072 95258592 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816010
chr1 95258382 95258397 MEF2A JASPAR yes 30916747
chr1 95258382 95258397 MEF2A JASPAR yes 118333980
Genes associated with rs146529967[chr1:95258397], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More