EnhancerDB
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  3. rs146533340[chr6:138132515]
Enhancers that have rs146533340[chr6:138132515]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138109536 138156015 enh23663
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr6 138131886 138133298 vista1496
VISTA
chr6 138132277 138133056 vista53756
VISTA
Transcript factors that have rs146533340[chr6:138132515]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 107693967
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 108541864
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 108541865
chr6 138132486 138132902 RELA UCSC Txn Factor no Conserved 107693968
chr6 138132486 138132902 RELA UCSC Txn Factor no Conserved 108541866
chr6 138132507 138132515 FOXC1 JASPAR yes 22279657
chr6 138132507 138132515 FOXC1 JASPAR yes 70446974
chr6 138132507 138132515 FOXC1 JASPAR yes 105679651
chr6 138132508 138132892 USF1 UCSC Txn Factor no Conserved 107693969
chr6 138132508 138132892 USF1 UCSC Txn Factor no Conserved 108541867
chr6 138132508 138132944 MAX UCSC Txn Factor no Conserved 107693970
chr6 138132508 138132944 MAX UCSC Txn Factor no Conserved 108541868
chr6 138132512 138132530 SRF JASPAR yes 22279658
chr6 138132512 138132530 SRF JASPAR yes 70446975
chr6 138132512 138132530 SRF JASPAR yes 105679652
chr6 138132514 138132530 SRF JASPAR yes 22279659
chr6 138132514 138132530 SRF JASPAR yes 70446976
chr6 138132514 138132530 SRF JASPAR yes 105679653
chr6 138132514 138132532 SRF JASPAR yes 22279660
chr6 138132514 138132532 SRF JASPAR yes 70446977
chr6 138132514 138132532 SRF JASPAR yes 105679654
chr6 138132515 138132527 SRF JASPAR yes 22279661
chr6 138132515 138132527 SRF JASPAR yes 70446978
chr6 138132515 138132527 SRF JASPAR yes 105679655
Genes associated with rs146533340[chr6:138132515], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More