EnhancerDB
  1. Home
  2. SNP
  3. rs146567087[chr16:85452940]
Enhancers that have rs146567087[chr16:85452940]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85446773 85473775 enh16869
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs146567087[chr16:85452940]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85451678 85455380 ZNF143 GTRD no Epithelial (MCF-7) 21725360
chr16 85451685 85455978 ZNF143 GTRD no Epithelial (MCF-7) 21725362
chr16 85451689 85455248 TCF7L2 GTRD no Colon (HCT116) 21725363
chr16 85451722 85454988 ZNF143 GTRD no Epithelial (MCF-7) 21725365
chr16 85451931 85455271 ZNF143 GTRD no Epithelial (MCF-7) 21725367
chr16 85452189 85454872 ZNF143 GTRD no Epithelial (MCF-7) 21725368
chr16 85452218 85454206 TCF7L2 GTRD no Colon (HCT116) 21725369
chr16 85452297 85454770 TCF7L2 GTRD no Colon (HCT116) 21725370
chr16 85452304 85454131 TCF7L2 GTRD no Colon (HCT116) 21725371
chr16 85452321 85453126 ZNF274 GTRD no Bone Marrow (K562) 21725372
chr16 85452363 85453163 ZNF274 GTRD no Bone Marrow (K562) 21725373
chr16 85452374 85454966 ZNF143 GTRD no Epithelial (MCF-7) 21725374
chr16 85452495 85453993 ZNF274 GTRD no Bone Marrow (K562) 21725376
chr16 85452502 85453001 ZNF274 GTRD no Bone Marrow (K562) 21725377
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 21725378
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214476
chr16 85452507 85466841 ZNF143 GTRD no Epithelial (MCF-7) 108214477
chr16 85452540 85453068 ZNF274 GTRD no Bone Marrow (K562) 21725381
chr16 85452618 85454174 ZNF143 GTRD no Epithelial (MCF-7) 21725384
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 21725385
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214478
chr16 85452649 85460292 ZNF143 GTRD no Epithelial (MCF-7) 108214479
chr16 85452684 85452974 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21725386
chr16 85452731 85452975 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725387
chr16 85452739 85453833 ZNF143 GTRD no Epithelial (MCF-7) 21725388
chr16 85452754 85452944 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21725389
chr16 85452762 85452978 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21725390
chr16 85452780 85453259 ZNF274 GTRD no Bone Marrow (K562) 21725391
chr16 85452828 85454207 ZNF143 GTRD no Epithelial (MCF-7) 21725392
chr16 85452835 85453245 ZNF274 GTRD no Bone Marrow (K562) 21725393
chr16 85452929 85452941 TAL1 JASPAR yes 12058837
chr16 85452939 85452949 SP1 JASPAR yes 12058839
Genes associated with rs146567087[chr16:85452940], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 85709804 85723679 - GINS2 ENSG00000131153.4 85723679 256864 Ovary 0.085757 15132