EnhancerDB
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  3. rs146612201[chr12:52609114]
Enhancers that have rs146612201[chr12:52609114]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146612201[chr12:52609114]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52608819 52609602 ZNF143 GTRD no Epithelial (MCF-7) 21546767
chr12 52608819 52609602 ZNF143 GTRD no Epithelial (MCF-7) 108033683
chr12 52609102 52609115 ZBTB18 JASPAR yes 120929006
chr12 52609103 52609115 PKNOX1 JASPAR yes 120929007
chr12 52609103 52609115 TGIF1 JASPAR yes 120929008
chr12 52609104 52609114 FIGLA JASPAR yes 120929010
chr12 52609104 52609114 ID4 JASPAR yes 120929011
chr12 52609104 52609114 TCF3 JASPAR yes 120929012
chr12 52609104 52609114 TCF4 JASPAR yes 120929013
chr12 52609106 52609115 ZEB1 JASPAR yes 120929014
chr12 52609106 52609116 TBX21 JASPAR yes 120929015
chr12 52609107 52609115 MGA JASPAR yes 120929016
chr12 52609107 52609115 TBX15 JASPAR yes 120929017
chr12 52609107 52609115 TBX1 JASPAR yes 120929018
chr12 52609107 52609115 TBX4 JASPAR yes 120929019
chr12 52609107 52609115 TBX5 JASPAR yes 120929020
chr12 52609107 52609117 TBR1 JASPAR yes 120929021
chr12 52609107 52609120 SMAD2 JASPAR yes 120929022
Genes associated with rs146612201[chr12:52609114], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More