EnhancerDB
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Enhancers that have rs146649966[chr19:13144941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146649966[chr19:13144941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13143942 13144975 ZNF143 GTRD no Epithelial (MCF-7) 21850224
chr19 13143942 13144975 ZNF143 GTRD no Epithelial (MCF-7) 108387576
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 21850225
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 108387577
chr19 13144064 13145064 TCF7L2 GTRD no Colon (HCT116) 21850227
chr19 13144064 13145064 TCF7L2 GTRD no Colon (HCT116) 108387579
chr19 13144122 13145006 ZNF143 GTRD no Epithelial (MCF-7) 21850229
chr19 13144122 13145006 ZNF143 GTRD no Epithelial (MCF-7) 108387581
chr19 13144568 13145023 ZNF274 GTRD no Bone Marrow (K562) 108387584
chr19 13144714 13145004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850231
chr19 13144714 13145004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387586
chr19 13144739 13145009 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108387587
chr19 13144752 13144952 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21850232
chr19 13144752 13144952 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108387588
chr19 13144864 13145384 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108387589
chr19 13144869 13145489 CTCF UCSC Txn Factor no Conserved 108387590
chr19 13144873 13145243 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108387591
chr19 13144876 13145246 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108387592
chr19 13144889 13145279 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108387593
chr19 13144889 13145285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21850233
chr19 13144889 13145285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108387594
chr19 13144903 13145188 RAD21 UCSC Txn Factor no Conserved 108387595
Genes associated with rs146649966[chr19:13144941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More