EnhancerDB
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  3. rs146678244[chr1:212109216]
Enhancers that have rs146678244[chr1:212109216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs146678244[chr1:212109216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212107063 212111534 ZNF274 GTRD no Bone Marrow (K562) 21377721
chr1 212108707 212109297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377734
chr1 212108803 212109223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377753
chr1 212108815 212109251 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377755
chr1 212108832 212109308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377758
chr1 212108839 212109219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377762
chr1 212108848 212109284 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377764
chr1 212108853 212109263 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377765
chr1 212108857 212109293 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377768
chr1 212108862 212109382 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377769
chr1 212108866 212109302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377770
chr1 212108874 212109238 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377772
chr1 212108885 212109265 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377773
chr1 212108906 212109496 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377775
chr1 212108930 212109266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377777
chr1 212109103 212109923 P63 GTRD no Skin (Keratinocyte) 21377778
chr1 212109104 212109994 P63 GTRD no Skin (Keratinocyte) 21377779
chr1 212109128 212109937 P63 GTRD no Skin (Keratinocyte) 21377780
chr1 212109185 212109922 P63 GTRD no Skin (Keratinocyte) 21377781
chr1 212109216 212109231 PRDM1 JASPAR yes 35093752
Genes associated with rs146678244[chr1:212109216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More