EnhancerDB
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  3. rs146779900[chr17:55976224]
Enhancers that have rs146779900[chr17:55976224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs146779900[chr17:55976224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55976129 55976729 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274691
chr17 55976161 55976681 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274692
chr17 55976217 55976227 SP1 JASPAR yes 54996686
Genes associated with rs146779900[chr17:55976224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More