EnhancerDB
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  3. rs146799260[chr1:27847746]
Enhancers that have rs146799260[chr1:27847746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146799260[chr1:27847746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27847742 27847757 TFAP2A JASPAR yes 27704478
chr1 27847742 27847757 TFAP2C JASPAR yes 27704479
chr1 27847744 27847759 TFAP2A JASPAR yes 27704480
chr1 27847744 27847759 TFAP2C JASPAR yes 27704481
chr1 27847745 27847756 TFAP2A JASPAR yes 27704482
chr1 27847745 27847756 TFAP2B JASPAR yes 27704483
chr1 27847745 27847756 TFAP2C JASPAR yes 27704484
chr1 27847745 27847757 TFAP2A JASPAR yes 27704485
chr1 27847745 27847757 TFAP2B JASPAR yes 27704486
chr1 27847745 27847757 TFAP2C JASPAR yes 27704487
chr1 27847746 27847755 TFAP2A JASPAR yes 27704488
Genes associated with rs146799260[chr1:27847746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More