EnhancerDB
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  3. rs146801398[chr1:16489062]
Enhancers that have rs146801398[chr1:16489062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 16489021 16489207 vista522
VISTA
Transcript factors that have rs146801398[chr1:16489062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16488711 16489231 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107802223
chr1 16489054 16489066 INSM1 JASPAR yes 27029445
chr1 16489054 16489066 INSM1 JASPAR yes 118238731
chr1 16489056 16489066 GCM2 JASPAR yes 27029446
chr1 16489056 16489066 GCM2 JASPAR yes 118238732
chr1 16489056 16489067 GCM1 JASPAR yes 27029447
chr1 16489056 16489067 GCM1 JASPAR yes 118238733
chr1 16489058 16489067 THAP1 JASPAR yes 27029448
chr1 16489058 16489067 THAP1 JASPAR yes 118238734
chr1 16489061 16489066 SP1 TRANSFAC yes 27029449
chr1 16489061 16489066 SP1 TRANSFAC yes 118238735
Genes associated with rs146801398[chr1:16489062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More