EnhancerDB
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  3. rs146823622[chr1:153483919]
Enhancers that have rs146823622[chr1:153483919]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146823622[chr1:153483919]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153483262 153483922 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21339472
chr1 153483293 153483937 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339473
chr1 153483403 153484086 ZNF143 GTRD no Epithelial (MCF-7) 21339480
chr1 153483411 153484216 ZNF143 GTRD no Epithelial (MCF-7) 21339481
chr1 153483480 153484242 ZNF143 GTRD no Epithelial (MCF-7) 21339506
chr1 153483514 153484167 ZNF143 GTRD no Epithelial (MCF-7) 21339513
chr1 153483607 153484008 ZNF143 GTRD no Epithelial (MCF-7) 21339515
chr1 153483615 153484140 ZNF143 GTRD no Epithelial (MCF-7) 21339516
chr1 153483631 153484149 ZNF143 GTRD no Epithelial (MCF-7) 21339517
chr1 153483673 153484066 ZNF143 GTRD no Epithelial (MCF-7) 21339518
chr1 153483718 153484215 TCF7L2 GTRD no Colon (HCT116) 21339519
chr1 153483755 153484110 ZNF143 GTRD no Epithelial (MCF-7) 21339520
chr1 153483916 153483924 HOXA5 JASPAR yes 32254984
chr1 153483919 153483932 POU2F2 JASPAR yes 32254985
Genes associated with rs146823622[chr1:153483919], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More