EnhancerDB
  1. Home
  2. SNP
  3. rs146894639[chr1:203486889]
Enhancers that have rs146894639[chr1:203486889]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146894639[chr1:203486889]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203486453 203488469 ZNF143 GTRD no Epithelial (MCF-7) 21369131
chr1 203486461 203488504 ZNF143 GTRD no Epithelial (MCF-7) 21369132
chr1 203486475 203488890 ZNF143 GTRD no Epithelial (MCF-7) 21369133
chr1 203486491 203488398 ZNF143 GTRD no Epithelial (MCF-7) 21369134
chr1 203486535 203488632 ZNF143 GTRD no Epithelial (MCF-7) 21369135
chr1 203486536 203488874 ZNF143 GTRD no Epithelial (MCF-7) 21369136
chr1 203486545 203488921 ZNF143 GTRD no Epithelial (MCF-7) 21369137
chr1 203486562 203488618 ZNF143 GTRD no Epithelial (MCF-7) 21369138
chr1 203486575 203488349 TCF7L2 GTRD no Colon (HCT116) 21369139
chr1 203486607 203488312 ZNF143 GTRD no Epithelial (MCF-7) 21369140
chr1 203486610 203488268 TCF7L2 GTRD no Colon (HCT116) 21369141
chr1 203486644 203486900 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369142
chr1 203486657 203488451 ZNF274 GTRD no Cervix (HeLa-S3) 21369144
chr1 203486657 203488644 ZNF274 GTRD no Cervix (HeLa-S3) 21369145
chr1 203486710 203488890 TCF7L2 GTRD no Colon (HCT116) 21369146
chr1 203486722 203488615 ZNF143 GTRD no Epithelial (MCF-7) 21369147
chr1 203486771 203488661 ZNF143 GTRD no Epithelial (MCF-7) 21369148
chr1 203486810 203488515 ZNF143 GTRD no Epithelial (MCF-7) 21369149
chr1 203486812 203488679 ZNF143 GTRD no Epithelial (MCF-7) 21369150
chr1 203486864 203488639 ZNF143 GTRD no Epithelial (MCF-7) 21369151
chr1 203486883 203486904 MAFG JASPAR yes 34634570
chr1 203486884 203488425 ZNF143 GTRD no Epithelial (MCF-7) 21369152
Genes associated with rs146894639[chr1:203486889], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More