EnhancerDB
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  3. rs146984313[chr12:52607862]
Enhancers that have rs146984313[chr12:52607862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146984313[chr12:52607862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52607436 52608287 ZNF143 GTRD no Epithelial (MCF-7) 21546751
chr12 52607463 52608228 ZNF143 GTRD no Epithelial (MCF-7) 21546752
chr12 52607494 52608065 ZNF143 GTRD no Epithelial (MCF-7) 21546753
chr12 52607497 52608217 ZNF143 GTRD no Epithelial (MCF-7) 21546754
chr12 52607501 52608050 ZNF143 GTRD no Epithelial (MCF-7) 21546755
chr12 52607617 52608060 ZNF143 GTRD no Epithelial (MCF-7) 21546756
chr12 52607625 52607988 ZNF143 GTRD no Epithelial (MCF-7) 21546757
chr12 52607853 52607862 NKX2-8 JASPAR yes 120928857
chr12 52607853 52607863 NKX2-3 JASPAR yes 120928858
chr12 52607854 52607862 ISL2 JASPAR yes 120928859
chr12 52607854 52607863 NKX3-2 JASPAR yes 120928860
chr12 52607862 52607872 NFIA JASPAR yes 120928861
Genes associated with rs146984313[chr12:52607862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More