EnhancerDB
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  3. rs147017955[chr16:85338201]
Enhancers that have rs147017955[chr16:85338201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147017955[chr16:85338201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85337445 85338531 TCF7L2 GTRD no Colon (HCT116) 21722997
chr16 85337498 85338597 TCF7L2 GTRD no Colon (HCT116) 21722998
chr16 85337503 85338444 TCF7L2 GTRD no Colon (HCT116) 21722999
chr16 85337527 85338579 ZNF143 GTRD no Epithelial (MCF-7) 21723000
chr16 85337554 85338581 ZNF143 GTRD no Epithelial (MCF-7) 21723001
chr16 85337843 85338258 ZNF274 GTRD no Bone Marrow (K562) 21723002
chr16 85338022 85338406 ZNF274 GTRD no Bone Marrow (K562) 21723003
chr16 85338091 85338335 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723004
chr16 85338197 85338208 TFAP2A JASPAR yes 12044602
chr16 85338197 85338208 TFAP2B JASPAR yes 12044603
chr16 85338197 85338208 TFAP2C JASPAR yes 12044604
chr16 85338198 85338207 TFAP2A JASPAR yes 12044605
chr16 85338199 85338219 RREB1 JASPAR yes 12044606
chr16 85338200 85338220 RREB1 JASPAR yes 12044607
chr16 85338201 85338208 SP1 TRANSFAC yes 12044608
chr16 85338201 85338211 SP1 JASPAR yes 12044609
Genes associated with rs147017955[chr16:85338201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More