EnhancerDB
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  3. rs147040474[chr1:201677180]
Enhancers that have rs147040474[chr1:201677180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147040474[chr1:201677180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201677175 201677185 ID4 JASPAR yes 34522632
chr1 201677175 201677185 TCF3 JASPAR yes 34522633
chr1 201677175 201677185 TCF4 JASPAR yes 34522634
chr1 201677176 201677185 SNAI2 JASPAR yes 34522635
chr1 201677177 201677182 USF2 TRANSFAC yes 34522636
chr1 201677180 201677184 NFE TRANSFAC yes 34522637
chr1 201677180 201677193 SMAD2 JASPAR yes 34522638
Genes associated with rs147040474[chr1:201677180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More