EnhancerDB
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  3. rs147129548[chr2:228271582]
Enhancers that have rs147129548[chr2:228271582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147129548[chr2:228271582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228270826 228271648 EP300 UCSC Txn Factor no Conserved 108435509
chr2 228271578 228271587 CDX1 JASPAR yes 81519794
chr2 228271578 228271589 CDX2 JASPAR yes 81519795
chr2 228271582 228271596 TLX1 JASPAR yes 81519796
Genes associated with rs147129548[chr2:228271582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More