EnhancerDB
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  3. rs147778009[chr12:52536202]
Enhancers that have rs147778009[chr12:52536202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs147778009[chr12:52536202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52536188 52536208 RREB1 JASPAR yes 120921157
chr12 52536192 52536202 FIGLA JASPAR yes 120921159
chr12 52536192 52536202 ID4 JASPAR yes 120921160
chr12 52536192 52536202 MSC JASPAR yes 120921161
chr12 52536192 52536202 MYF6 JASPAR yes 120921162
chr12 52536192 52536202 TCF3 JASPAR yes 120921163
chr12 52536192 52536202 TCF4 JASPAR yes 120921164
chr12 52536202 52536207 TFAP2A TRANSFAC yes 120921165
chr12 52536202 52536208 MZF1 JASPAR yes 120921166
Genes associated with rs147778009[chr12:52536202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More