EnhancerDB
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  3. rs147828409[chr3:58335147]
Enhancers that have rs147828409[chr3:58335147]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58318801 58350235 enh7249
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs147828409[chr3:58335147]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58335138 58335148 SREBF1 JASPAR yes 2688159
chr3 58335138 58335148 SREBF2 JASPAR yes 2688160
chr3 58335143 58335151 NR4A2 JASPAR yes 2688161
Genes associated with rs147828409[chr3:58335147], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More