EnhancerDB
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  3. rs147942978[chr1:16512424]
Enhancers that have rs147942978[chr1:16512424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs147942978[chr1:16512424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16512411 16512429 RARA JASPAR yes 27032884
chr1 16512418 16512431 NR2F1 JASPAR yes 27032885
chr1 16512419 16512437 RARA JASPAR yes 27032886
chr1 16512421 16512429 NR4A2 JASPAR yes 27032887
chr1 16512422 16512439 RARA JASPAR yes 27032888
chr1 16512422 16512439 RXRA JASPAR yes 27032889
Genes associated with rs147942978[chr1:16512424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More