EnhancerDB
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  3. rs148052998[chr17:62969471]
Enhancers that have rs148052998[chr17:62969471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148052998[chr17:62969471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62966518 62969728 ZBTB33 GTRD no Lung (A549) 21780368
chr17 62966542 62969569 ZNF143 GTRD no Epithelial (MCF-7) 21780369
chr17 62966602 62969622 AR GTRD no Prostate (PC-3) 21780373
chr17 62967925 62969679 ZBTB33 GTRD no Lung (A549) 21780400
chr17 62968221 62969557 ZNF143 GTRD no Epithelial (MCF-7) 21780413
chr17 62968298 62969627 ZNF143 GTRD no Epithelial (MCF-7) 21780441
chr17 62968328 62969518 ZNF143 GTRD no Epithelial (MCF-7) 21780459
chr17 62969460 62969473 DUXA JASPAR yes 55333514
chr17 62969461 62969472 DUX4 JASPAR yes 55333515
Genes associated with rs148052998[chr17:62969471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More