EnhancerDB
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  3. rs148125058[chr1:19273776]
Enhancers that have rs148125058[chr1:19273776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148125058[chr1:19273776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19271677 19273824 TCF7L2 GTRD no Colon (HCT116) 107802286
chr1 19273767 19273782 TFAP2A JASPAR yes 27164858
chr1 19273770 19273781 TFAP2A JASPAR yes 27164859
chr1 19273770 19273781 TFAP2B JASPAR yes 27164860
chr1 19273770 19273781 TFAP2C JASPAR yes 27164861
chr1 19273771 19273780 TFAP2A JASPAR yes 27164862
Genes associated with rs148125058[chr1:19273776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More