EnhancerDB
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  3. rs148227540[chr15:59023904]
Enhancers that have rs148227540[chr15:59023904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 59014654 59038375 enh3620
Liver Astrocyte Blood (Karpas-422) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr15 59023904 59024166 vista20132
VISTA
Transcript factors that have rs148227540[chr15:59023904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 59023886 59024296 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108141104
chr15 59023893 59023910 RARA JASPAR yes 23695672
chr15 59023893 59023910 RARA JASPAR yes 70531701
chr15 59023894 59024338 ZNF274 GTRD no Bone Marrow (K562) 108141105
chr15 59023898 59023908 SREBF1 JASPAR yes 23695673
chr15 59023898 59023908 SREBF2 JASPAR yes 23695674
chr15 59023898 59023908 SREBF1 JASPAR yes 70531702
chr15 59023898 59023908 SREBF2 JASPAR yes 70531703
chr15 59023899 59023917 ESR1 JASPAR yes 23695675
chr15 59023899 59023917 ESR1 JASPAR yes 70531704
Genes associated with rs148227540[chr15:59023904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More