EnhancerDB
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  3. rs148279955[chr2:228263541]
Enhancers that have rs148279955[chr2:228263541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148279955[chr2:228263541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228263529 228263542 SCRT2 JASPAR yes 81518421
chr2 228263535 228263545 TBX21 JASPAR yes 81518422
chr2 228263535 228263548 EOMES JASPAR yes 81518423
chr2 228263536 228263544 MGA JASPAR yes 81518424
chr2 228263536 228263544 TBX15 JASPAR yes 81518425
chr2 228263536 228263544 TBX1 JASPAR yes 81518426
chr2 228263536 228263544 TBX4 JASPAR yes 81518427
chr2 228263536 228263544 TBX5 JASPAR yes 81518428
chr2 228263536 228263551 JUND JASPAR yes 81518429
chr2 228263539 228263554 JUND JASPAR yes 81518430
chr2 228263540 228263553 JUN JASPAR yes 81518431
chr2 228263541 228263548 JUN TRANSFAC yes 81518432
Genes associated with rs148279955[chr2:228263541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More