EnhancerDB
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  3. rs148383853[chr1:232759232]
Enhancers that have rs148383853[chr1:232759232]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs148383853[chr1:232759232]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232759222 232759237 SCRT1 JASPAR yes 36178620
chr1 232759223 232759233 ID4 JASPAR yes 36178621
chr1 232759223 232759233 TCF3 JASPAR yes 36178622
chr1 232759223 232759233 TCF4 JASPAR yes 36178623
chr1 232759224 232759233 SNAI2 JASPAR yes 36178624
Genes associated with rs148383853[chr1:232759232], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More