EnhancerDB
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  3. rs148539246[chr1:224680454]
Enhancers that have rs148539246[chr1:224680454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148539246[chr1:224680454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224680451 224680466 SCRT1 JASPAR yes 35706327
chr1 224680454 224680466 PKNOX1 JASPAR yes 35706328
chr1 224680454 224680466 PKNOX2 JASPAR yes 35706329
chr1 224680454 224680466 TGIF1 JASPAR yes 35706330
chr1 224680454 224680466 TGIF2 JASPAR yes 35706331
Genes associated with rs148539246[chr1:224680454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More