EnhancerDB
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  3. rs148554574[chr17:34227856]
Enhancers that have rs148554574[chr17:34227856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 34227790 34227961 vista24550
VISTA
Transcript factors that have rs148554574[chr17:34227856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34227786 34228186 ZNF143 GTRD no Epithelial (MCF-7) 21751117
chr17 34227786 34228186 ZNF143 GTRD no Epithelial (MCF-7) 108251402
chr17 34227843 34227861 ESR2 JASPAR yes 21226266
chr17 34227843 34227861 ESR2 JASPAR yes 54020869
chr17 34227845 34227860 ESR2 JASPAR yes 21226267
chr17 34227845 34227860 ESR2 JASPAR yes 54020870
chr17 34227847 34227861 FOXF2 JASPAR yes 21226269
chr17 34227847 34227861 FOXF2 JASPAR yes 54020872
chr17 34227850 34227862 FOXI1 JASPAR yes 21226270
chr17 34227850 34227862 FOXI1 JASPAR yes 54020873
chr17 34227852 34227860 FOXG1 JASPAR yes 21226271
chr17 34227852 34227860 FOXG1 JASPAR yes 54020874
chr17 34227854 34227860 HiNF-A TRANSFAC yes 21226272
chr17 34227854 34227860 HiNF-A TRANSFAC yes 54020875
Genes associated with rs148554574[chr17:34227856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More