EnhancerDB
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  3. rs148787939[chr16:89384305]
Enhancers that have rs148787939[chr16:89384305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148787939[chr16:89384305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89382350 89384827 ZNF143 GTRD no Epithelial (MCF-7) 21738071
chr16 89382350 89384827 ZNF143 GTRD no Epithelial (MCF-7) 107687425
chr16 89382350 89384827 ZNF143 GTRD no Epithelial (MCF-7) 108225518
chr16 89382532 89384670 ZNF143 GTRD no Epithelial (MCF-7) 21738090
chr16 89382532 89384670 ZNF143 GTRD no Epithelial (MCF-7) 108225539
chr16 89382593 89384430 ZNF143 GTRD no Epithelial (MCF-7) 21738097
chr16 89382593 89384430 ZNF143 GTRD no Epithelial (MCF-7) 108225546
chr16 89382613 89384523 ZNF143 GTRD no Epithelial (MCF-7) 21738100
chr16 89382613 89384523 ZNF143 GTRD no Epithelial (MCF-7) 108225549
chr16 89382665 89384330 ZNF143 GTRD no Epithelial (MCF-7) 21738102
chr16 89382665 89384330 ZNF143 GTRD no Epithelial (MCF-7) 108225551
chr16 89382691 89384853 ZNF143 GTRD no Epithelial (MCF-7) 21738105
chr16 89382691 89384853 ZNF143 GTRD no Epithelial (MCF-7) 107687426
chr16 89382691 89384853 ZNF143 GTRD no Epithelial (MCF-7) 108225554
chr16 89382741 89384363 ZNF143 GTRD no Epithelial (MCF-7) 21738110
chr16 89382741 89384363 ZNF143 GTRD no Epithelial (MCF-7) 108225560
chr16 89382816 89384341 ZNF274 GTRD no Liver (HepG2) 21738118
chr16 89382816 89384341 ZNF274 GTRD no Liver (HepG2) 108225568
chr16 89382821 89384820 ZNF143 GTRD no Epithelial (MCF-7) 21738120
chr16 89382821 89384820 ZNF143 GTRD no Epithelial (MCF-7) 107687427
chr16 89382821 89384820 ZNF143 GTRD no Epithelial (MCF-7) 108225570
chr16 89382883 89384733 TCF7L2 GTRD no Colon (HCT116) 21738130
chr16 89382883 89384733 TCF7L2 GTRD no Colon (HCT116) 108225580
chr16 89382938 89384725 ZNF143 GTRD no Epithelial (MCF-7) 21738143
chr16 89382938 89384725 ZNF143 GTRD no Epithelial (MCF-7) 108225593
chr16 89382948 89384847 ZNF143 GTRD no Epithelial (MCF-7) 21738147
chr16 89382948 89384847 ZNF143 GTRD no Epithelial (MCF-7) 107687428
chr16 89382948 89384847 ZNF143 GTRD no Epithelial (MCF-7) 108225597
chr16 89384292 89384310 RARA JASPAR yes 12330462
Genes associated with rs148787939[chr16:89384305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More