EnhancerDB
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  3. rs148862777[chr16:89542968]
Enhancers that have rs148862777[chr16:89542968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs148862777[chr16:89542968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89542950 89542970 TP63 JASPAR yes 12348650
chr16 89542951 89542969 TP53 JASPAR yes 12348651
chr16 89542953 89542968 TP53 JASPAR yes 12348652
chr16 89542961 89542970 SNAI2 JASPAR yes 12348654
chr16 89542961 89542971 TCF4 JASPAR yes 12348655
chr16 89542963 89542972 ZEB1 JASPAR yes 12348656
chr16 89542965 89542970 SP1 TRANSFAC yes 12348657
chr16 89542968 89542972 LFA1 TRANSFAC yes 12348658
Genes associated with rs148862777[chr16:89542968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More