EnhancerDB
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  3. rs148898000[chr17:1896543]
Enhancers that have rs148898000[chr17:1896543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs148898000[chr17:1896543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1896536 1896551 MEF2C JASPAR yes 52713960
chr17 1896542 1896563 IRF1 JASPAR yes 52713961
chr17 1896543 1896558 FOXP1 JASPAR yes 52713962
chr17 1896543 1896564 IRF1 JASPAR yes 52713963
Genes associated with rs148898000[chr17:1896543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More