EnhancerDB
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  3. rs1490190[chr1:151910494]
Enhancers that have rs1490190[chr1:151910494]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs1490190[chr1:151910494]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151906905 151911039 ZNF143 GTRD no Epithelial (MCF-7) 21338207
chr1 151906905 151911039 ZNF143 GTRD no Epithelial (MCF-7) 107829639
chr1 151907151 151910853 ZNF274 GTRD no Bone Marrow (K562) 21338209
chr1 151907151 151910853 ZNF274 GTRD no Bone Marrow (K562) 107829640
chr1 151907174 151910717 ZNF143 GTRD no Epithelial (MCF-7) 21338211
chr1 151907174 151910717 ZNF143 GTRD no Epithelial (MCF-7) 107829641
chr1 151907522 151910939 ZNF274 GTRD no Bone Marrow (K562) 21338226
chr1 151907522 151910939 ZNF274 GTRD no Bone Marrow (K562) 107829642
chr1 151907933 151910727 ZNF274 GTRD no Bone Marrow (K562) 21338235
chr1 151907933 151910727 ZNF274 GTRD no Bone Marrow (K562) 107829645
chr1 151907940 151910854 ZNF274 GTRD no Blood (GM12878) 21338236
chr1 151907940 151910854 ZNF274 GTRD no Blood (GM12878) 107829646
chr1 151907941 151910590 ZNF274 GTRD no Bone Marrow (K562) 21338237
chr1 151907941 151910590 ZNF274 GTRD no Bone Marrow (K562) 107829647
chr1 151908097 151910773 ZNF143 GTRD no Epithelial (MCF-7) 21338245
chr1 151908097 151910773 ZNF143 GTRD no Epithelial (MCF-7) 107829651
chr1 151908634 151910832 ZNF143 GTRD no Epithelial (MCF-7) 21338273
chr1 151908634 151910832 ZNF143 GTRD no Epithelial (MCF-7) 107829662
chr1 151908694 151910623 ZBTB33 GTRD no Lung (A549) 107829663
chr1 151908763 151910574 ZBTB33 GTRD no Lung (A549) 107829667
chr1 151908914 151910553 ZBTB33 GTRD no Lung (A549) 107829683
chr1 151908925 151910497 ZNF274 GTRD no Blood (GM12878) 21338289
chr1 151908925 151910497 ZNF274 GTRD no Blood (GM12878) 107829687
chr1 151908983 151910648 ZNF143 GTRD no Epithelial (MCF-7) 21338305
chr1 151908983 151910648 ZNF143 GTRD no Epithelial (MCF-7) 107829706
chr1 151908988 151910532 ZNF274 GTRD no Blood (GM12878) 21338307
chr1 151908988 151910532 ZNF274 GTRD no Blood (GM12878) 107829709
chr1 151908988 151910720 ZNF274 GTRD no Blood (GM12878) 21338308
chr1 151908988 151910720 ZNF274 GTRD no Blood (GM12878) 107829710
chr1 151909011 151910533 ZNF274 GTRD no Bone Marrow (K562) 21338319
chr1 151909011 151910533 ZNF274 GTRD no Bone Marrow (K562) 107829726
chr1 151909024 151910500 ZNF274 GTRD no Bone Marrow (K562) 21338324
chr1 151909024 151910500 ZNF274 GTRD no Bone Marrow (K562) 107829734
chr1 151909034 151910618 ZNF274 GTRD no Bone Marrow (K562) 21338328
chr1 151909034 151910618 ZNF274 GTRD no Bone Marrow (K562) 107829742
chr1 151909039 151910901 ZNF143 GTRD no Epithelial (MCF-7) 21338330
chr1 151909039 151910901 ZNF143 GTRD no Epithelial (MCF-7) 107829746
chr1 151910295 151911297 ZNF274 GTRD no Bone Marrow (K562) 21338475
chr1 151910488 151910494 SOX10 JASPAR yes 32204924
Genes associated with rs1490190[chr1:151910494], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More