EnhancerDB
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  3. rs1490509[chr4:119890116]
Enhancers that have rs1490509[chr4:119890116]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 119883665 119898966 enh21748
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Peripheral Blood (MM.1S) Uterus Adrenal Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs1490509[chr4:119890116]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 119890100 119890121 IRF1 JASPAR yes 92361070
chr4 119890104 119890116 IRF1 JASPAR yes 92361071
chr4 119890105 119890126 IRF1 JASPAR yes 92361072
chr4 119890106 119890127 IRF1 JASPAR yes 92361073
chr4 119890107 119890122 IRF9 JASPAR yes 92361074
chr4 119890108 119890122 IRF7 JASPAR yes 92361075
chr4 119890108 119890122 IRF8 JASPAR yes 92361076
chr4 119890109 119890127 IRF2 JASPAR yes 92361077
chr4 119890110 119890122 IRF1 JASPAR yes 92361078
chr4 119890110 119890125 STAT2 JASPAR yes 92361079
chr4 119890111 119890126 FOXP1 JASPAR yes 92361080
chr4 119890111 119890132 IRF1 JASPAR yes 92361081
chr4 119890113 119890125 FOXC2 JASPAR yes 92361082
chr4 119890113 119890128 IRF9 JASPAR yes 92361083
chr4 119890114 119890128 IRF7 JASPAR yes 92361084
chr4 119890115 119890129 STAT1 JASPAR yes 92361085
chr4 119890115 119890130 STAT2 JASPAR yes 92361086
chr4 119890116 119890125 SRY JASPAR yes 92361087
chr4 119890116 119890128 IRF1 JASPAR yes 92361088
chr4 119890116 119890131 FOXP1 JASPAR yes 92361089
Genes associated with rs1490509[chr4:119890116], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More