EnhancerDB
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  3. rs149069413[chr1:225636939]
Enhancers that have rs149069413[chr1:225636939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs149069413[chr1:225636939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225636734 225637047 ZNF143 GTRD no Epithelial (MCF-7) 21384733
chr1 225636798 225637448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384734
chr1 225636919 225637249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384735
chr1 225636919 225637303 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384736
chr1 225636934 225636940 ZNF354C JASPAR yes 35741476
chr1 225636939 225636953 PLAG1 JASPAR yes 35741477
Genes associated with rs149069413[chr1:225636939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More